Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs72501232 chr4:70060709 A/T 5.73E-13 118 39.75 49.6 6 KM Plot
THYM rs72501233 chr4:70061879 T/C 5.73E-13 118 39.75 49.6 6 KM Plot
THYM rs72501234 chr4:70064745 T/C 5.73E-13 118 39.75 49.6 6 KM Plot
THYM rs72501235 chr4:70064937 A/G 5.73E-13 118 39.75 49.6 6 KM Plot
THYM rs72501237 chr4:70083781 G/C 5.73E-13 118 39.75 49.6 6 KM Plot
THYM rs72501239 chr4:70105054 C/G 4.7E-13 119 41.77 35 6 KM Plot
THYM rs72501250 chr4:70254391 T/A 6.15E-13 118 41.77 42.3 6 KM Plot
THYM rs72542923 chr19:29322599 G/GACA 3.56E-5 115 46.23 38.33 20.23 KM Plot
THYM rs72601811 chr4:70081568 AG/A 5.73E-13 118 39.75 49.6 6 KM Plot
THYM rs72607821 chr4:70328347 A/T 1.54E-12 114 42.73 34.93 6 KM Plot
THYM rs72632805 chr1:227465892 A/G 0.000123 119 42.82 37.13 19.63 KM Plot
THYM rs72632807 chr1:227471340 C/T 0.000123 119 42.82 37.13 19.63 KM Plot
THYM rs72632810 chr1:227475934 A/G 0.000123 119 42.82 37.13 19.63 KM Plot
THYM rs72632812 chr1:227477253 T/C 0.000123 119 42.82 37.13 19.63 KM Plot
THYM rs72632813 chr1:227478796 G/A 0.000123 119 42.82 37.13 19.63 KM Plot